In all probability you may well get away with it, as the contact integrity of those cap pins is not brilliant when its fitted correctly anyway.
The cap is supposed to short the TX data line to +ve and the RX data line to 0V (or maybe the other way round - must check sometime).
... anyway the purpose of this is so your ECU does NOT get spurious (from electrical noise) signals on those lines, which are the RS 232 communications ports, then try to respond to the communications interrupt while its doing important time-critical stuff like the ignition/fuel control, which for obvious reasons is not desirable.
Worst case scenario is that the RS232 drivers on the ECU PCB gets incorrect voltages and go 'pop' - but this is probably unlikely.
The effect of such a failure is simply that the diagnostics box at the stealer (or a laptop as I use) won't work due to no communications .... and as I understand it, this is actually fixable (by the right person with no vested interest in the extra profit from selling you a new ECU).